rplanes - Plausibility Analysis of Epidemiological Signals
Provides functionality to prepare data and analyze plausibility of both forecasted and reported epidemiological signals. The functions implement a set of plausibility algorithms that are agnostic to geographic and time resolutions and are calculated independently then presented as a combined score.
Last updated 4 months ago
6.16 score 8 stars 7 scripts 148 downloads
pracpac - Practical 'R' Packaging in 'Docker'
Streamline the creation of 'Docker' images with 'R' packages and dependencies embedded. The 'pracpac' package provides a 'usethis'-like interface to creating Dockerfiles with dependencies managed by 'renv'. The 'pracpac' functionality is described in Nagraj and Turner (2023) <doi:10.48550/arXiv.2303.07876>.
Last updated 1 years ago
5.40 score 25 stars 5 scripts 636 downloadsskater - Utilities for SNP-Based Kinship Analysis
Utilities for single nucleotide polymorphism (SNP) based kinship analysis testing and evaluation. The 'skater' package contains functions for importing, parsing, and analyzing pedigree data, performing relationship degree inference, benchmarking relationship degree classification, and summarizing identity by descent (IBD) segment data. Package functions and methods are described in Turner et al. (2021) "skater: An R package for SNP-based Kinship Analysis, Testing, and Evaluation" <doi:10.1101/2021.07.21.453083>.
Last updated 2 years ago
5.26 score 9 stars 7 scripts 150 downloads