Package: rplanes 0.1.0
rplanes: Plausibility Analysis of Epidemiological Signals
Provides functionality to prepare data and analyze plausibility of both forecasted and reported epidemiological signals. The functions implement a set of plausibility algorithms that are agnostic to geographic and time resolutions and are calculated independently then presented as a combined score.
Authors:
rplanes_0.1.0.tar.gz
rplanes_0.1.0.zip(r-4.5)rplanes_0.1.0.zip(r-4.4)rplanes_0.1.0.zip(r-4.3)
rplanes_0.1.0.tgz(r-4.4-any)rplanes_0.1.0.tgz(r-4.3-any)
rplanes_0.1.0.tar.gz(r-4.5-noble)rplanes_0.1.0.tar.gz(r-4.4-noble)
rplanes_0.1.0.tgz(r-4.4-emscripten)rplanes_0.1.0.tgz(r-4.3-emscripten)
rplanes.pdf |rplanes.html✨
rplanes/json (API)
NEWS
# Install 'rplanes' in R: |
install.packages('rplanes', repos = c('https://signaturescience.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/signaturescience/rplanes/issues
Last updated 4 months agofrom:6e9fe6d516. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 15 2024 |
R-4.5-win | OK | Nov 15 2024 |
R-4.5-linux | OK | Nov 15 2024 |
R-4.4-win | OK | Nov 15 2024 |
R-4.4-mac | OK | Nov 15 2024 |
R-4.3-win | OK | Nov 15 2024 |
R-4.3-mac | OK | Nov 15 2024 |
Exports:%>%%m-%is_forecastis_observedplane_coverplane_diffplane_repeatplane_scoreplane_seedplane_shapeplane_taperplane_trendplane_zeroread_forecastrplanes_explorerto_signalvalid_dates
Dependencies:bitbit64clicliprcpp11crayondplyrdtwecpfansigenericsgluehmslifecyclelubridatemagrittrpillarpkgconfigprettyunitsprogressproxypurrrR6Rcppreadrrlangstringistringrtibbletidyrtidyselecttimechangetzdbutf8vctrsvroomwithr
Basic Usage
Rendered frombasic-usage.Rmd
usingknitr::rmarkdown
on Nov 15 2024.Last update: 2024-07-17
Started: 2023-10-25
PLANES Components
Rendered fromplanes-components.Rmd
usingknitr::rmarkdown
on Nov 15 2024.Last update: 2024-07-17
Started: 2023-12-20
PLANES Interpretation
Rendered frominterpretation.Rmd
usingknitr::rmarkdown
on Nov 15 2024.Last update: 2024-07-17
Started: 2024-07-17
rplanes Explorer
Rendered fromrplanes-explorer.Rmd
usingknitr::rmarkdown
on Nov 15 2024.Last update: 2023-12-20
Started: 2023-12-20
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Check completeness of seed and signal data | check_incomplete |
Sliding windows | create_sliding_windows_df |
Cut into categorical differences | cutter |
Epiweek start | epiweek_start |
Determine shapes | get_shapes |
Check forecast | is_forecast |
Check observed | is_observed |
Month start | month_start |
Coverage component | plane_cover |
Difference component | plane_diff |
Repeat component | plane_repeat |
Score PLANES components | plane_score |
Create seed | plane_seed |
Shape component | plane_shape |
Taper component | plane_taper |
Trend component | plane_trend |
Zero component | plane_zero |
Quantile boundary | q_boundary |
Read in forecast file | read_forecast |
Resolve resolution | resolve_resolution |
'rplanes' explorer app launcher | rplanes_explorer |
Seed engine | seed_engine |
Chunk a vector | to_chunk |
Create signal object | to_signal |
Validate dates | valid_dates |
Validate location | valid_location |